carolynzy

Installation error, cd-hit version, cant open file while Combine proteins into a single file

3

Hi, I'm working on WSL system with Roary. I had the following issue while installation: > $sudo cpanm -f Bio::Roary > --> Working on Bio::Roary > Fetching http://www.cpan.org/authors/id/A/AJ/AJPAGE/Bio-Roary-3.13.0.tar.gz ... OK...

Hi, I'm trying to remove contamination using the following commands: >$nextflow run ~/clockwork/nextflow/remove_contam.nf -with-singularity ~/clockwork/singularity/clockwork_container.img --ref_fasta ~/clockwork/ref_data/OUT/ref.fa --ref_metadata_tsv ~/clockwork/ref_data/OUT/remove_contam_metadata.tsv --reads_in1 1_1.fq --reads_in2 1_2.fq --outprefix remove_contam.out and got the error message:...

Hi, I just want to report an issue which might be a bug. When I tried "make" in the fold, it gave me the following error message: ` ../common/datastructures/alignmentset/SAMAlignment.h:221:33: error:...

error with relabel command

2

I have this error message when using relabel command : ---Fatal error--- Missing input file name I used the following files in the command: newick -relabel NP_214621.nwk.txt -labels labels.txt -output...