Xiaoyi Cao

Currently you may be able to save SVG file via developing tools only. We are exploring an easier way to do so and may include this functionality in the future.

It appears that in the Chr1 region there is indeed only one gene, so the lower panel should be expected. For the upper panel this is indeed weird. Do you...

I think the BED display should be fixed by now. `gene-coor-input` element has also been updated and is awaiting documentation.

If you use GIVE HUG to create your HTML code, you may use the "Default coordinates" field to specify the genomic position. You may look up gene name if the...

This function has been added in commit https://github.com/Zhong-Lab-UCSD/Genomic-Interactive-Visualization-Engine/commit/ffe886b47b78206388549306132e8f4ffdf8826f. Will work on documentation in the next major update.

Unfortunately GFF/GTF files are not supported yet. Currently only UCSC annotation format or plain BED format is supported. We are exploring the possibility of including GFF/GTF support in upcoming updates.

Could you please be more specific about how you installed GIVE locally? If your local GIVE installation is under your web server path (assume you have MySQL and a web...

Have you changed the settings under `/html/components/basic-func/constants.js`? You may change the settings following this paragraph in [2.2 Custom Installation of GIVE](https://github.com/Zhong-Lab-UCSD/Genomic-Interactive-Visualization-Engine/blob/master/tutorials/2.2-custom-installation.md) > After installation, please make a copy of /basic-func/constants-template.js...

The `` element was developed quite early (well before the alpha stage of GIVE) so the documentation and back-end support is different from most of the other elements. Currently it...

For now, there are several ways of changing references: * Re-align everything in the new reference. * Using liftOver on the raw reads and generate bigWig files again. Quality may...