Brad Langhorst
Brad Langhorst
Sorry about the poor git practice here... didn't know i should have rebased instead of merging until now... and I'm out of time figure out how to fix things. Hopefully...
e.g. catting gzipped input produces this error ( +gzip nonsense) but a successful output code. ``` cat test.fq.gz | fastp --stdin || echo "failed" && echo "success" Adapter auto-detection is...
Sometimes it's nice to sample a fixed number of reads from many libraries during analysis. I think it's not important that the *exact* number of reads be the same for...
https://www.gocontrol.com/detail.php?productId=3 ### Expected behavior Thermostat is recognized ### Actual behavior error message when setup button is pressed ### Steps to reproduce the problem starting from a fresh install 1. Join...
``` Traceback (most recent call last): File "/home/NEB/langhorst/miniconda2/envs/khmer/bin/unique-kmers.py", line 166, in main() File "/home/NEB/langhorst/miniconda2/envs/khmer/bin/unique-kmers.py", line 155, in main to_print = graphsize_args_report(cardinality, args.error_rate) File "/home/NEB/langhorst/miniconda2/envs/khmer/lib/python2.7/site-packages/khmer/khmer_args.py", line 354, in graphsize_args_report optimal_size(unique_kmers, fp_rate=fp_rate...
wish i could check this... did not quickly find data or histories to share
Maybe this is related to #58 ... but for mbias. To get duplicates to be included I had to include both -F and --keepDupes: ``` MethylDackel mbias --noSVG --keepDupes -F...
running this ``` bedtools unionbedg -i