Brad Langhorst

Option to turn of gzip output

4

When seqprep is used in galaxy, many downstream tools cannot handle the gzipped data (e.g. bowtie). I'm unzipping in the wrapper for seqprep, but that's pretty dumb (zip then imediately...

Picard mergebam: fixes bad option for single end bams

7

FOR CONTRIBUTOR: * [x] - I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo. * [x] - License permits unrestricted use (educational + commercial)...

Adds a new picard module that can be used for downsampling bam files ## PR checklist I think i've followed all the conventions - except maybe the required arguments recommendation....

It would be good to add support for NS 2000 as well.