Bui Hoang Phuc

Results 3 issues of Bui Hoang Phuc

Dear everyone, I used snippy to check SNP compared to reference H, pylori 26695. However, I got this error. Does anyone get same problem with me? Thank you ### echo...

I got this error like this. Does anyone can help to fix?? I run command on HPC: snippy --R1 $p_trim/VN0467_1_paired.fastq.gz --R2 $p_trim/VN0467_2_paired.fastq.gz --outdir /lustre7/home/buihoangphuc412/Projects/GWAS/variant/VN0467 --prefix VN0467 --ref $p_ref/genome/CHC97.fasta --report --cpus...

I used download_mlst_databases but cannot connect to https://pubmlst.org/data/dbases.xml Can I download it manually and copy into folder?