Brett Chapman

I'll try removing ```/include``` and run again

It got further along now, but failed a series of tests: ``` graph: valid graph: valid graph: valid graph: valid t/53_clip.t ........... 1..13 ok 1 - clipped graph is valid...

Because the tests fail the entire installation into Docker fails too. Is there a way to skip tests?

Theres one line with ```make test``` in the Dockerfile. I'm skipping it now and rerunning.

I managed to get it working now by commenting out the ```/include``` and the ```make test``` line in the Dockerfile. I'm running vg index now with setting -s to the...

I'm also getting this error with v3.8.1 even though I've specified ```--bam_csi_index``` as one of the parameters

Ok. Thanks for the suggestion.

Thanks for your help. The issue was there was no open port setup on the server. It is fixed now. I've set the open ports to HTTP and HTTPS and...

Thanks for the update! I look forward to using it with Docker.

Thanks for your feedback @fossilfriend I'll try out the methods you mention and see how I go. I've also come across tools such as DeepGraph (https://deepgraph.readthedocs.io/en/latest/) and Networkit (https://networkit.github.io/), which...