Brent Pedersen

Results 1174 comments of Brent Pedersen

I would use: ``` try: from itertools import izip as zip # and other imports except: pass ```

cruzdb is only required if you use --db, so just omit that and combined-pvalues should work for you.

hi, yes, I mean to run without --anno. It looks like you might have it working, but you have a bad gzipped file. Perhaps you can run on uncompressed input...

thanks for the interest. For now, gargs sacrifices some functionality of ease-of-use and implementation. I agree that most of these would be useful, but I haven't had a need for...

Hi, I'd accept a PR to fix this in gargs.

Hmm, I haven't tried clang. Maybe we can upgrade Cython and get this fixed. For now, can you try: ``` ARCHFLAGS=-Wno-error=unused-command-line-argument-hard-error-in-future sudo pip install fisher ``` That's from here: http://stackoverflow.com/questions/22312583/cant-install-mysql-gem-on-os-x...

Hi, there are examples [here](https://github.com/brentp/combined-pvalues/tree/master/examples) with a readme in each of those directories. If you have any questions about those examples let me know. If you show the command that...

here are other files: https://github.com/brentp/combined-pvalues/tree/master/examples/fake/

+1 would be nice to have this as the default. I don't have nim idetools either.

Hi, this was an oversight. I added a `mosdepth_d4` binary to the 0.3.8 release.