bigly
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features for webserver
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[ ] coordinate y-axes across samples
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[ ] add per-sample spinner.
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[x] cancel previous request when new one is made
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[ ] make legend click work on all plots (currently just top plot)
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[ ] add "weird orientation line"
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[x] bigly: split weird count into +/+, -/-, -/+
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[x] don't show soft clips < 4.
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[ ] add simple repeats + micro satellites track
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[x] make IGV bounds match those from the plot exactly.
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[ ] report insert size as number of std-devs above/below the mean calculated by sampling the bam.
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[ ] change bigly to accept a bam.Reader
Hey Brent,
One of the issues we are seeing with interpreting putative SVs is the lack of simple repeat and microsatellite tracks. Is this something that would be easy to add if I gave you the BED tracks that I typically use?
yes