Aaron Quinlan

Results 16 repositories owned by Aaron Quinlan

bedtools

139
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87
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A powerful toolset for genome arithmetic.

bedtools2

899
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283
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bedtools - the swiss army knife for genome arithmetic

gemini

315
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118
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a lightweight db framework for exploring genetic variation.

bedtools-protocols

77
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24
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bedtools-python

28
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9
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A Python interface to the BEDTools API using Cython

bits

23
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8
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BITS: Binary Interval Search

cyvcf

52
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13
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A fast Python library for VCF files leveraging Cython for speed.

filo

44
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7
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Useful FILe and stream Operations

ggd

43
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2
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grabix

83
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12
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a wee tool for random access into BGZF files.