bounlu
bounlu
Everybody gets the same error and this is still not solved: https://github.com/nf-core/sarek/issues/1625
I still have the same problem in `conda 24.7.1` and it's very dangerous to downgrade conda back to `22`: ``` $ conda update --all Channels: - conda-canary - bioconda -...
Thanks so much for pointing me to the available docs. I think adding a step to the pipeline for generation of custom panel resource files would be great, just like...
Hi @scwatts Would you be able to provide more information how to prepare the **Driver Gene Panel** file for custom panels? For example, what do the column headers mean exactly...
@Sanat-Mishra I am using the [Docker image](quay.io/biocontainers/cnvkit:0.9.11--pyhdfd78af_0) but still get the same error. @etal In my `.cnr` file, the weights column are empty for antitarget regions.
@alekhka is my hero too. this is the only solution that worked for me as well.
@matanster wow, can conda really upgrade your python to that high? 😁
When I use `--no_charts` flag for `purple`, it succeeds without generating the plots. However, this time `orange` fails as the expected `purple_plot_dir` does not exist: ``` ERROR ~ Error executing...
It turns out to be version `0.9.11` does not accept `weight` column to be blank anywhere. If I modify the `.cnr` file by inserting 1 to the empty rows in...
[This](https://github.com/etal/cnvkit/issues/760#issuecomment-2296478429) might be the issue.