Bo Li issues

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Results 4 issues of


                                            Bo Li

Fixed a bug that makes tSNE output change every time even with the same random seed

[Feature request] Parsing gzipped file for --barcode-whitelist and --barcode-translation

For 10x data, cellranger-atac/cellranger-arc make their whitelist in .tsv.gz format. It would be convenient if chromap can take gzipped file as input here (similar to fastq file). Thanks for developing...

enhancement

Do you want to also refer Harmony-PyTorch to Python users?

Dear Harmony Team, @ilyakorsunsky Are you interested in also refer Harmony-Pytorch to python users? https://github.com/lilab-bcb/harmony-pytorch Thanks, Bo

Bo Li

Fixed a bug that makes tSNE output change every time even with the same random seed

[Feature request] Parsing gzipped file for --barcode-whitelist and --barcode-translation

Do you want to also refer Harmony-PyTorch to Python users?

Compiled cfishers.pyx with Cython 0.29.4 for Python 3.7