Daniel Blankenberg

Not Björn, but this uses GNU cut underneath, which does not allow rearrangement or duplication of columns. A more 'honest' representation of 'cut', I suppose. Definitely not as useful as...

My pleasure @gallardoalba. Mind doing a test install to confirm that it is actually working?

Suggest: - add shebang to top of `.py` files. - add `__version__` string constant and `--version` argument - Move the converter code to a separate package repository, where installing it...

That being said, i am +1 on merging this, if additional time is not available for changes.

made a pr against @davebx https://github.com/davebx/tools-iuc/pull/4

One important issue is that we should be using the taxonomy found in the kraken database directories, not the separately maintained ncbi taxonomy.

potential solution for shutdown of cellxgene: https://github.com/chanzuckerberg/cellxgene/pull/1127

Here is what I did: - Enable setting in galaxy.yml: enable_user_based_object_store: true - cp config/object_store_conf.xml.sample config/object_store_conf.xml - Start galaxy. - Post via curl: curl -H "Content-Type: application/json" -d '{"category": "local",...

ping @nekrut

should add tests for the new options