Blake Sweeney
Blake Sweeney
The GO annotations we currently show in the GO annotations table also link to proteins. It would be nice to show these interactions in the Target Proteins table as well....
There was some confusion at the SAB about what organisms were had. It was expected that for strep we would have TIGER4, and we do, but it doesn't appear first....
If a user enters the name of a gene (e.g. `XIST`) we should put a high weight on all results that have that exact string in the gene field. Consider...
A common task for a user is to have a gene they are interested in and want to look at the genomic region near it. Thus we should allow people...
Sequence search should be able to provide a way to generate a multiple sequence alignment. This may need to wait until after #345 to allow (or force) the user to...
This is generally expected. Additionally, it is helpful to tune upwards in cases when there are few matches. As it is possible to get bad hits in the search and...
So if you got to /search without a query you get a blank page. See: http://rnacentral.org/search. This is a pretty strange page to go to, but hey it is possible.
For some reason sometimes the correct sequence does not show up in genome browser. For example, this snoRNA: https://rnacentral.org/rna/URS0000ABD8DD/9606 is within this lncRNA: https://rnacentral.org/rna/URS0000D6E287/9606 but the lncRNA does not appear...
We are looking at the metadata file for CRW now (https://github.com/RNAcentral/R2DT/blob/master/data/crw-metadata.tsv) and it would be helpful if the models had more precise terms. Specifically there are several models labeled mt_rRNA....
It would be very helpful for integration with other data sources if all nucleotides in the svg output of R2DT included a `data-sequence-index` (and something similar in the JSON format)...