RNA-seq

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if i not the root ，can this workflow run without docker

3

Thank you very much for sharing the software. I don't have root permission, and I can't run docker. If not docker image, can I run it successfully?

wangjiaxuan666

Unable to run v4.0.0 or develop (#d5f7d1f) locally

4

Hi I am interested in hosting this workflow on a Cromwell-enabled platform, but I've been seeing errors even trying it locally with both the stable and develop branches using these...

leipzig

outputDir ties running RNA-seq to local file system - support for cloud file systems

5

I'm trying to get this running on Google Cloud Platform using [https://github.com/broadinstitute/wdl-runner](url) Unfortunately, the outputDir is pervasive throughout the WDL files and seems to be a show stopper. I've modified...

TomGardner

Shiny interface for WDL pipelines

1

Hello,Is it possible to create a UI using rshiny for wdl pipeline, so that the user can set the JSON file parameters( input and output) via the rshiny UI and...

gadepallivs