bids-specification

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FOI: some points for possible interactions with DICOM WGs

4

edit: bullet points from a [brief presentation/discussion](https://datasets.datalad.org/centerforopenneuroscience/talks/2023-bids-dicom.html#) with DICOM WG 16 on Jun 14, 2023. - collect/collate/pass information on metadata desired to be present in BIDS - channel to DICOM...

yarikoptic

MRI: Improve definition of bvec file

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Closes #243. Making an attempt to resolve this issue as ensuring that the definition here is robust and consistent across different softwares will be essential to verifying the definition of...

Lestropie

[ENH] move definition of raw and derivatives datasets to common principles

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- closes None but relates to https://github.com/bids-standard/bids-specification/issues/1812#issuecomment-2095632418 --- - HTML - https://bids-specification--1815.org.readthedocs.build/en/1815/common-principles.html#definitions - note that those definitions are now also part of the glossary --- - This makes the definition...

Remi-Gau

[ENH] apply derivative definition to qMRI

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- closes #1812 --- - update qMRI sections that mention qmaps: https://bids-specification--1813.org.readthedocs.build/en/1813/appendices/qmri.html#outputs-are-quantitative-maps

Remi-Gau

[ENH] Add stimulus and annotation entities

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**stimulus** and **annotation** entities are necessary to distinguish various stimulus files and possible different annotations per each stimulus file. A sample use-case of these entities is presented in bids-standard/bids-examples#433. Both...

neuromechanist

update qMRI to align with the new definition of derivatives

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1. qmri appendix defines quantitative maps as derivatives regardless of how they were generated https://bids-specification.readthedocs.io/en/latest/appendices/qmri.html#quantitative-maps-are-derivatives > Regardless of how they are obtained (pre- or post-generated), qMRI maps are stored in...

Remi-Gau

Update motion.md

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arnodelorme

DSC and DCE perfusion mris corresponding suffix in bids format

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Hello, We are trying to convert a brain tumor dataset into the bids format. This dataset has DSC perfusion mris. However, in the bids documentation I only found an equivalent...

MeryemABBAD

In "Common principles", "Storage of derived datasets": > it is RECOMMENDED to use the format `-` in cases where it is anticipated that the same pipeline will output more than...

Lestropie

[FIX] Change hipCT microscopy suffix to XPCT

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Following the discussion at #1646, I am reverting @balbasty's PR #1686 with `XPCT` instead of `hipCT`: it is more suited for a broader audience.

chourroutm