BIDS Apps

icon indicating a website link http://bids-apps.neuroimaging.io

icon location A collection of containerized neuroimaging workflows and pipelines that accept datasets organized according to the Brain Imaging Data Structure (BIDS).

Results 5 repositories owned by BIDS Apps

freesurfer

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BIDS app wrapping recon-all from FreeSurfer

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HCPPipelines

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A BIDS App for minimal preprocessing using the HCP Pipelines

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rsHRF

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Resting state HRF estimation from BOLD-fMRI signal

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MRtrix3_connectome

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Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.

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example

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This an example app that can serve as a template.

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