Ben Sherman

Results 474 comments of Ben Sherman

I realized I've been seeing this issue for a while with nf-core pipelines. As described in the OP, if you set `params.outdir` in a config file instead of on the...

See my comment in #4215 . This happens because `meta.id` is normally evaluated during script execution, at which point `meta` isn't defined yet. But if you wrap it in a...

Closing this PR because it has gone stale. Most of the language edits have been merged through other PRs, the subpage refactoring will be decided as part of the docs...

Hi @ebioman , it was not included in v22.10. Based on the [merge commit](https://github.com/nextflow-io/nextflow/commit/b548e1c785aa5c1fcb8978001a77ecaa84d7cc36), it is available in all of the edge releases since then. I would just use the...

Changes look good, I would say just revert the tokenize since the space after `-l` is not required.

I agree. Maybe we could just keep the tokenize and see what happens? 😅

@pditommaso I updated and cleaned up this PR. To review, it adds fractional CPU support to the Local, K8s, and Google Batch executors. Otherwise fractional requests are rounded to the...

Nextflow has a config option `aws.batch.retryMode` ([docs](https://nextflow.io/docs/edge/config.html#scope-aws)), which respects rate-limiting responses by default. However this setting is only applied to CLI commands used by tasks and not to the AWS...