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de novo targeted gene assembly

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The use of OpenMPI by parts of ABySS requires specifying the number of physical CPU cores to use. However, there's no such requirement for the rest of the tools used...

Include a script that uses an existing k-mer counter package to create a repeat filter. It should be part of the standard kollector pipeline. Candidate packages to use for this:...

enhancement

Assigning the _r score_ in form of decimal number creates large off target effect in the recruitment. Could you please allow the user to use only integer numbers?