Ashot Margaryan

Error with find-sites

15

Hi Brent, Thanks for Somalier, it's quite fast and straightforward to use! At the moment I am also trying to extract sites more tailored to my dataset with "find-sites". While...

new module: SOMALIER/EXTRACT

1

### Is there an existing module for this? - [X] I have searched for the existing module ### Is there an open PR for this? - [X] I have searched...

Hi, I would like to request a container for the tool hap-ibd: https://github.com/browning-lab/hap-ibd I have already created a pull request for this: https://github.com/BioContainers/containers/pull/468 Thanks in advance!

Hapibd

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## PR checklist Closes #XXX - [ ] This comment contains a description of changes (with reason). - [x] If you've fixed a bug or added code that should be...

More than one record found in handle

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Hi, Thanks a lot for creating treetime, looks like a very useful tool and I wanted to run this for reconstructing the ancestral sequences of my yeast genomes. I run:...

### Description of feature In some of our use cases we might have hundreds of targets, so it would be great if crisprseq could also analyse more than one target...