Ashot Margaryan
Ashot Margaryan
That's what I figured, thanks! Yes, I had used the `nf-core modules create` which is why I was confused. When I made my previous module (somalier), all my new module...
Aaaah, ok, I am using version 2.4.1.
I just did, thanks! Will now try with that one :)
Last time, with older version of nf-core the `nf-core modules create-test-yml hapibd` worked like charm for generating the test.yml file. However this time it's not the case unfortunately. I can't...
I just tried the singularity and it seems to work on my machine. The `PROFILE=singularity pytest --tag hapibd --symlink --keep-workflow-wd` command give the below output, but not sure why it...
Hi @pawelciurkaardigen, could you perhaps check this again? The singularity check keeps failing and we (@nvnieuwk and I) don't really know why and how to proceed next. I can run...
Hi @jfy133 , would you have time to replicate this singularity issue?
Thanks a lot @jfy133 for having a look at this ;)
Hi guys, thanks for getting the discussion going and @edmundmiller for creating this issue. This issue was created due to the errors we had when we were running not very-long...
Thanks for the feedback @rneher! I was thinking/hoping of simply extracting e.g., chromosome-1 from both the fasta and the vcf, and run only for that chromosome-1 (then of course loop...