Arta Seyedian

Results 17 issues of Arta Seyedian

Hello, My colleagues and I have been able to use Tangram to successfully map genes onto our Visium spatial dataset thanks to your incredibly helpful tutorial. However, we would like...

Hello. I am trying to reproduce the results from this [study here](https://github.com/USDA-FSEPRU/PorcinePBMCs_bulkRNAseq_scRNAseq/blob/main/Analysis_scRNAseq/002_Alignment.md#porcine-immune-single-cell-atlas) and I am getting the following error with no additional information: ```sh /mnt/xxx/rcorrector/jellyfish/bin/jellyfish bc -m 25 -s 100000000...

https://github.com/lelechen63/ATVGnet/blob/2d4d1b03df1c706c6575b942fd2a1585347c4aab/requirement.txt#L9 The above line in `requirements.txt` throws a pretty long error that is not worth reproducing in its entirety: ``` Getting requirements to build wheel ... error ERROR: Command errored...

**Is your feature request related to a problem? Please describe.** This plug-in is amazing, and honestly has been a big reason why I'm getting back into reading. I feel like...

enhancement

Hi Wenbao, I'm working with scATAC-pro to integrate 28 samples together using the following script (based on a script that I believe you authored): ```sh #!/bin/bash #SBATCH --job-name=merge_allPeaks_scATAC # Job...

Hello, I am having an issue with the samples that were able to successfully work and produce allele counts with `pileup_and_phase.R`. I call the container using `singularity` like so: ```sh...

It would be cool if there was a way to natively filter events with this plugin. I have a calendar feed for school that lumps together TA office hours with...

question

Original post on Discord [here](https://discord.com/channels/799706244264362024/1037768911443210270/1287435349546500167). Whenever I rename an item, it disappears from the Space. I found the following potentially relevant error message from the console here: ``` plugin:make-md:300 Uncaught...

## Prologue This is an x-post from https://github.com/DSpace/dspace-angular/issues/3406; it started with me thinking this was mostly a frontend issue and now I'm not quite sure, because I think the source...

bug
needs triage

## Describe the bug I would like a way for our DSpace `item-submission.xml` and `submission-form.xml` files to enforce the `dspace.entity.type` during the submission process. Right now, while we have mapped...

bug
needs triage