Weiwen Wang

Results 8 comments of Weiwen Wang

@govinda-kamath Thanks for the quite reply. It works with networkx v1.9!!. I have another question: can Hinge assembly a genome with low read coverage? I tried to different coverage, and...

I set the min_cov to one, but can't make it work. [log.txt](https://github.com/HingeAssembler/HINGE/files/1351274/log.txt)

The draft.fasta is an empty file. The input coverage is 10. /home/raymond/work/Eucalyptus_pauciflora/genome/bin/assembly/hinge/data/pacbioName/lowCoverage//10coverage.pacbioName.fasta result//10coverage [2017-10-03 16:57:32.560] [log] [info] Reads filtering [2017-10-03 16:57:32.560] [log] [info] name of db: 10coverage, name of .las...

the length of genome is 160kb

Whatever, Hinge is good. It can assemble a more complete genome compared to Canu, using the same coverage, default setting.

Hi btcometz, Thanks, I have downloaded it, but it complained with another missing h5 file: `denseweight.h5` now. Cheers, R

> @asdcid @sailseem hi, guys, any lucky to make it run? No, I gave up. Sorry.