Artur Sannikov

Results 18 comments of Artur Sannikov

@antagomir, the image `ghcr.io/js2264/oma:latest` is not built anymore. This [image](https://github.com/microbiome/OMA/pkgs/container/oma) should be made public. We can then close. I'll open a PR to update README.

Someone with access to the container registry settings, needs to make the image public.

It took > 1 hour to build: https://github.com/artur-sannikov/OMA/actions/runs/10280588960/job/28448241727#step:12:8806, but the building part was successful. It was not pushed due to token permissions I think, but it's not a problem. I...

I don't think there are limitations from technical point of view. In one of MOFA vignettes they used [5 experiments](https://raw.githack.com/bioFAM/MOFA2_tutorials/master/R_tutorials/scNMT_gastrulation.html).

> Do you mean that pseudocount=TRUE does not work if the data contains zero or missing values? Sorry, I just realized I wrote 0 or missing values. I meant negative...

1. Yes 2. I see. you are saying that in case of some assays, like "clr" where negative values are possible, if we take the minimum _positive_ value, and add...

In the case of my data, I tried to transform relative abundances into clr. But because I had some missing values, I got the error from my first message. My...

* I think the error message with solution suggestion in the most important way to handle it. * The docs can also be updated with a short description of how...