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Published 20 hours ago • verified publisher icon microbiome

Improve Docker container

Open artur-sannikov opened this issue 7 months ago • 14 comments

Right now Docker container is very basic and cannot be used.

I managed to run in with Podman 4.8.3 :

podman pull https://github.com/js2264/OMA/pkgs/container/OMA
podman run --rm -p 8787:8787 <container_id>

It's then accessible on localhost:8787. Username root and password is given in shell.

There are no accessible files in RStudio web-interface. Inside the container there is a OMA_0.98.16.tar.gz archive.

BiocBook supports containerization, so it a Docker image might be nice to have because it can help avoid all dependency issues on different platforms and their versions people run.

artur-sannikov avatar Jan 10 '24 11:01 artur-sannikov