Arnold Kuzniar

Results 33 issues of Arnold Kuzniar

e.g., [OpenJ9](https://adoptopenjdk.net/), [GraalVM](https://www.graalvm.org/)

`delly filter...` -> `bcftools filter...` for both single- and paired-sample modes

question

1. Implement a bioinformatics workflow in CWL to execute several structural variant (SV) callers on human DNA samples. A simplified conceptual view of this workflow can be found [here]. A...

Python [docopt](http://docopt.org/) could be an alternative to [click](http://click.pocoo.org/).

The link to the tutorial in PDF is broken.

Enhancement
GridEngine Adaptor

It would be great if one could easily access these data (e.g. output of SGE: _qacct_ or SLURM: _sacct_ commands) from a single interface.

Enhancement
API

For example, _Software_ page: [sv-gen](https://www.research-software.nl/software/sv-gen) was developed in the GTCG project, and includes related software (Xenon CLI, YAtiML and sv-callers). Note: the first two are dependencies so one could obtain...

enhancement

Hi, I've tried to color the points by a categorical variable (another column in my TSV file) but only got a greyish 3D point cloud. Tested on Firefox 56.0/Chrome 61.0.3163.100,...