Arnold Kuzniar comments

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                                            Arnold Kuzniar

SO property for GFF "source" field

In my GFF file there are, for example, gene features predicted by the Eugene software (indicated in the _source_ field). Similarly to the gene _feature type_ (SO_0000704). I would like...

SO property for GFF "source" field

Hi @keilbeck, any suggestions wrt. SO and _source_ field in GFF?

C++: linters and profilers

Another useful blog on pros/cons of different profilers can be found [here](http://gernotklingler.com/blog/gprof-valgrind-gperftools-evaluation-tools-application-level-cpu-profiling-linux/). In addition to these tools, there is an interesting one called [PAPI](http://icl.cs.utk.edu/papi/software/) using hardware performance counters but I...

Update SV callers to the latest versions

Hi @lsantuari, please use GH Actions instead of Travis (#55).

Create a conda package for scriptcwl

Thanks @bldevries-escience. I will test on Linux/Mac.

Create a conda package for scriptcwl

Tested on Linux/python 2.7.13 ``` BUILD START: scriptcwl-0.5.1-py36_0 (actual version deferred until further download or env creation) Can't build /home/arni/gitrepos/scriptcwl due to unsatisfiable dependencies: The following specifications were found to...

Create a conda package for scriptcwl

the solutions is to specify the python version for the conda-build `conda-build --python 2.7 .`

Create a conda package for scriptcwl

on Mac OS X got the following error: ``` Traceback (most recent call last): File "/Users/arni/miniconda3/bin/conda-build", line 11, in sys.exit(main()) File "/Users/arni/miniconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line 388, in main execute(sys.argv[1:]) File "/Users/arni/miniconda3/lib/python3.6/site-packages/conda_build/cli/main_build.py", line...