ylark

Hi, Thanks much for the sva package. I followed the Vignettes example using bladderEset. Without the sva adjustment, the sum(qValues

--skip_mtag run problem

2

Hi, Thanks for the mtag software! I finished the mtag run and tried to get maxFDR in a separate run with --skip_mtag option. My command is " python ~/work_dir/software_install/mtag/mtag.py --skip_mtag...

DUP and DUP:TANDEM

2

Hi, I noticed that the lumpy vcf header included both DUP and DUP:TANDEM sv types. I am wondering if lumpy's DUP are actually just DUP:TANDEM, since PE and SR can...

Hi, Thanks a lot for your software! We am planning to perform Differential Expression (DE) between different cell types, on many batches of count matrix data totaling >1M cells. As...