Ash O'Farrell

Results 44 comments of Ash O'Farrell

Seeking assistance on the build errors -- I don't quite have the bandwidth to decode the logs to figure out what is failing.

Updated to the latest GATK docker.

@lbergelson @droazen Both of you committed changes to the Dockerfile recently, but as far as I can tell they are not security related. Should I keep this PR at [4.2.4.1](https://hub.docker.com/layers/broadinstitute/gatk/4.2.4.1/images/sha256-421d2fb2cc869249cef3f4d7a77289256d295b04ba623096228e0e5fd42939e9?context=explore)?

@lbergelson @droazen @ahaessly Sorry for the ping, but I believe this vulnerability still persists.

It looks like the link OP posted is now a 404, but I'd also like to voice an interest in this option. I have written a few workflows by now...

Slack's changes to the free plan will leave the Cromwell and OpenWDL Slacks almost unusable pretty soon. Is there any plan to mirror their contents before the majority of the...

@timchu90 I can't speak for OP, but last I heard, Cromwell supports WDL version 1.0 best. Try running a workflow with only version 1.0 syntax.

AFAIK this isn't a feature yet. I looked into Cromwell's logging system to see if I could come up with a hack, but it's a bit beyond me. See also:...

Did some testing with the Dockstore team and concluded that ghcr.io images do technically seem to be getting pulled, but there's an issue with the hash. In the short term...

> I can confirm that disabling this setting, **Docker for Mac > Preferences > Experimental Features > Use gRPC for file sharing** makes the miniwdl unit test suite work well...