cromwell
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overly verbose Checkpointing info logging msgs
I'm seeing tons of these info logging messages from the checkpointing system (shown below).
Is there a way to turn them off or set them to a 'debug' rather than an 'info' logging level?
[2021-05-06 08:27:27,34] [info] Checkpoint start [2021-05-06 08:27:27,34] [info] checkpointClose start [2021-05-06 08:27:27,34] [info] checkpointClose synched [2021-05-06 08:27:27,34] [info] checkpointClose script done [2021-05-06 08:27:27,34] [info] dataFileCache commit start [2021-05-06 08:27:27,34] [info] dataFileCache commit end [2021-05-06 08:27:27,36] [info] checkpointClose end [2021-05-06 08:27:27,36] [info] Checkpoint end - txts: 6340 [2021-05-06 08:27:27,36] [info] Checkpoint start [2021-05-06 08:27:27,36] [info] checkpointClose start [2021-05-06 08:27:27,36] [info] checkpointClose synched [2021-05-06 08:27:27,37] [info] checkpointClose script done [2021-05-06 08:27:27,37] [info] dataFileCache commit start [2021-05-06 08:27:27,37] [info] dataFileCache commit end [2021-05-06 08:27:27,39] [info] checkpointClose end [2021-05-06 08:27:27,39] [info] Checkpoint end - txts: 6347 [2021-05-06 08:27:27,39] [info] Checkpoint start [2021-05-06 08:27:27,39] [info] checkpointClose start [2021-05-06 08:27:27,39] [info] checkpointClose synched [2021-05-06 08:27:27,39] [info] checkpointClose script done [2021-05-06 08:27:27,39] [info] dataFileCache commit start [2021-05-06 08:27:27,39] [info] dataFileCache commit end [2021-05-06 08:27:27,41] [info] checkpointClose end [2021-05-06 08:27:27,41] [info] Checkpoint end - txts: 6349 [2021-05-06 08:27:27,41] [info] Checkpoint start [2021-05-06 08:27:27,41] [info] checkpointClose start [2021-05-06 08:27:27,41] [info] checkpointClose synched [2021-05-06 08:27:27,41] [info] checkpointClose script done [2021-05-06 08:27:27,41] [info] dataFileCache commit start [2021-05-06 08:27:27,41] [info] dataFileCache commit end [2021-05-06 08:27:27,42] [info] checkpointClose end [2021-05-06 08:27:27,42] [info] Checkpoint end - txts: 6351 [2021-05-06 08:27:27,42] [info] Checkpoint start [2021-05-06 08:27:27,42] [info] checkpointClose start [2021-05-06 08:27:27,42] [info] checkpointClose synched ...
AFAIK this isn't a feature yet. I looked into Cromwell's logging system to see if I could come up with a hack, but it's a bit beyond me.
See also: https://github.com/broadinstitute/cromwell/issues/3919