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🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!

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[Lossius A, Johansen JN, Vartdal F, Robins H, Jūratė Šaltytė B, Holmøy T, Olweus J. High-throughput sequencing of TCR repertoires in multiple sclerosis reveals intrathecal enrichment of EBV-reactive CD8+ T...

meta-paper

Hi, I have a dataset with 344393 clonotypes, when I upload this into VDJdb it gives me around 500 matches, but when I split the same dataset into 3 parts...

Hi all, Could I please submit these records from the following paper which is not out yet: Newborn and child-like molecular signatures in elderly stem from TCR shifts across the...

paper-pending

VDJ sequences of Mtb peptide specific CD8+ TCRs recognizing two HLA-E specific Mtb peptides that have been identified via tetramer sorting and sequencing. Belongs to the manuscript: Mtb specific HLA-E...

paper-pending

Hi, I am not sure of the best format to send you my data. I have TCR sequencing data from Adaptive Biotechnologies on sorted CD4+ T cells with specificity for...

vdjdb-records-paper
vdjdb-records-associations

subj.

vdjdb-records-formatting&proofreading

Hi, Can I please submit these records for the paper which has just been published under the pubmed ID: 38684663 ? CD8+ T-cell responses towards conserved influenza B virus epitopes...

I have found a few small discrepancies between some VDJDb entries and their corresponding structures as follows: - complex id 2769 points structure.id to 6UON, however the CDR3 sequences do...

vdjdb-records-formatting&proofreading