vdjdb-db

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Fazilleau et al. 'Persistence of autoreactive myelin oligodendrocyte glycoprotein (MOG)-specific T cell repertoires in MOG-expressing mice' MOG33-55 specific TCRb and a few TCRa

ustervbo

Check nomenclature in PMID:9971792

3

The nomenclature used in PMID:9971792 seems to follow Kabat The TCR information in the paper is | v.beta | cdr3.beta | j.beta | d.beta | v.alpha | cdr3.alpha | j.alpha...

ustervbo

The used nomenclature seems to be non-IMGT

ustervbo

The used nomenclature seems to be non-IMGT

ustervbo

Our laboratory mostly use overlapping peptide pools and occasionally test for allo-reaction in transplantation settings. Others use lysates of whole pathogens. I think it could be relatively easy to add...

ustervbo

Publication: Greenshields-Watson et al. Conserved CD4+ T cell Influenza Epitopes. School of medicine, Cardiff University. Status: Undergoing re-submission.

ALGW71

https://www.nature.com/articles/s41590-019-0320-6

mikessh

Add segment naming conversions

2

Convert from ``BVxSx`` (old nomenclature) -> ``TRBVx-x`` (IMGT). Use http://imgt.org/IMGTrepertoire/index.php?section=LocusGenes&repertoire=nomenclatures&species=human&group=TRBV

mikessh

[Luo G, Ambati A, Lin L, Bonvalet M, Partinen M, Ji X, Maecker HT, Mignot EJ. Autoimmunity to hypocretin and molecular mimicry to flu in type 1 narcolepsy. Proc Natl...

mikessh

[Precopio ML, Betts MR, Parrino J, Price DA, Gostick E, Ambrozak DR, Asher TE, Douek DC, Harari A, Pantaleo G, Bailer R, Graham BS, Roederer M, Koup RA. Immunization with...

mikessh