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Properties with non-standard OBO identifier structures

Open anitacaron opened this issue 2 years ago • 3 comments

Some of these properties exist in RO or can be moved there. Otherwise, they should be replaced with numeric identifiers.

http://purl.obolibrary.org/obo/uberon/core#anastomoses_with http://purl.obolibrary.org/obo/uberon/core#anteriorly_connected_to http://purl.obolibrary.org/obo/uberon/core#channel_for http://purl.obolibrary.org/obo/uberon/core#distally_connected_to http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into http://purl.obolibrary.org/obo/uberon/core#filtered_through http://purl.obolibrary.org/obo/uberon/core#has_start http://purl.obolibrary.org/obo/uberon/core#in_innermost_side_of http://purl.obolibrary.org/obo/uberon/core#in_outermost_side_of http://purl.obolibrary.org/obo/uberon/core#indirectly_supplies http://purl.obolibrary.org/obo/uberon/core#layer_part_of http://purl.obolibrary.org/obo/uberon/core#posteriorly_connected_to http://purl.obolibrary.org/obo/uberon/core#protects http://purl.obolibrary.org/obo/uberon/core#proximally_connected_to http://purl.obolibrary.org/obo/uberon/core#sexually_homologous_to http://purl.obolibrary.org/obo/uberon/core#site_of http://purl.obolibrary.org/obo/uberon/core#subdivision_of http://purl.obolibrary.org/obo/uberon/core#transitively_anteriorly_connected_to http://purl.obolibrary.org/obo/uberon/core#transitively_connected_to http://purl.obolibrary.org/obo/uberon/core#transitively_distally_connected_toh http://purl.obolibrary.org/obo/uberon/core#transitively_proximally_connected_to http://purl.obolibrary.org/obo/uberon/core#trunk_part_of

These two already exist in RO: http://purl.obolibrary.org/obo/uberon/core#conduit_for http://purl.obolibrary.org/obo/uberon/core#synapsed_by

  • [x] https://github.com/obophenotype/uberon/issues/2811

Discussion about moving these properties to RO: http://purl.obolibrary.org/obo/uberon/core#channels_from http://purl.obolibrary.org/obo/uberon/core#channels_into

  • [ ] https://github.com/obophenotype/uberon/issues/2445

anitacaron avatar Feb 28 '23 12:02 anitacaron

are there reasons these can't all be pushed up to RO (other than time/effort)? I'm sure there are similar uses across other parts of the OBO world

cthoyt avatar Feb 28 '23 12:02 cthoyt

This issue has not seen any activity in the past 6 months; it will be closed automatically one year from now if no action is taken.

github-actions[bot] avatar Oct 17 '23 01:10 github-actions[bot]

This issue has not seen any activity in the past 6 months; it will be closed automatically one year from now if no action is taken.

github-actions[bot] avatar May 14 '24 01:05 github-actions[bot]