Andrew Su

I was referring to this page https://wikidata.org/wiki/User:ProteinBoxBot/evidence

I do not know, but I assume it's something the EPC WG is working on...

... and I just realized I raised a similar question in #282. So I'm rereading the discussion over there as well...

they are for different edge types (gene-disease vs drug-gene). Perhaps if one of them were explained/closed then the other would be clear too...

This new structure makes perfect sense to me, thanks! so 👍 if this issue gets closed on merge...

TCGA data can be accessed/downloaded from https://portal.gdc.cancer.gov/. Not sure if they provide a pre-summarized file of variant frequencies by cancer type, or if we would have to download the raw...

web portal for browsing data: https://search.cancervariants.org

ugh, CCLE terms of use are pretty restrictive for redistribution https://portals.broadinstitute.org/ccle/about. Useful data and they do provide it in a structured format that could be easily parsed, but we'd have...

Let's create this as a standalone "pending" API for now. Also, let's create this as an "association"-style API, where each document describes a triple (subject/object/predicate). This aligns with how we...

A few followups to @colleenXu's reply, hitting the bullet points in order: * sure, if protein type is easily added under `subject.protein_type`, sounds good. I don't see an immediate application...