Andrew Kern

create `snakemake` wrapper for `msp`?

2

TIL that `snakemake` now has features "tool wrappers" which allows popular command line tools to be used more simply with `snakemake` workflows: https://snakemake.readthedocs.io/en/stable/tutorial/additional_features.html#tool-wrappers I wonder if users would like an...

Drift trajectory implementation

21

this PR is dealing with issues #1762 and #1780. this implements a NeutralFixation model, which deals with a structured coalescent model akin to a selective sweep but for the case...

`write_vcf` returning position 0

29

hey team- working with @mufernando on some stdpopsim coding we stumbled upon a bug with `write_vcf`. using the default `position_transform` value, `write_vcf` can return position `0` which isn't allowed under...

seeing some strange output when multiple ancient samples are defined. there might be a bug but i'm not certain yet. USERS BEWARE.

ideal protein concentration?

7

over on #2 @joelmcg brings up the suggestion of using high gluten flours like Sir Lancelot or All Trumps, and notes > Sir Lancelot has 14.2% protein. King Arthur All-Purpose...