Alex Reynolds
Alex Reynolds
Consider generic unsorted/malsorted input: ``` $ echo -e 'chr1\t100\t200\nchr2\t200\t300\nchr10\t300\t400' > test.bed $ cat test.bed chr1 100 200 chr2 200 300 chr10 300 400 ``` Chopping up by chromosome `chr1` works,...
Given `A.bed`: ``` chr1 2849089 2849142 id-639 35 . -1 -1 3.51493 ``` Given `B.bed`: ``` chr1 2849089 2849124 i 0.000838724 chr1 2849124 2849125 i 0.000305542 chr1 2849125 2849132 i...
Examine reserving 256 or 512-byte block after the magic bytes to store a progress string that: 1. Gets replaced every m elements by n chromosomes with a status string. 2....
Bedgraph files compress very well as Starch archives. However, use of Bedgraph files with `bedmap` and similar requires an ID placeholder in the fourth column. Investigate adding a `--placeholder-id=` option...
Cf. https://github.com/Cyan4973/xxHash
## Description > What was changed in this pull request? When the `showMousePosition` option is set to `true` and the mouse pointer moves over a non-2d track, x and y...
## Description > What was changed in this pull request? Small modifications to server API documentation. > Why is it necessary? Current sample requests in documentation return an empty result,...
_Commit_: Tag `v1.8.5` of `higlass` Branch `master` of `higlass-multivec` #### Steps to reproduce To see the error, I load a new viewconf into a `HiGlassComponent` container. The changes to the...
## Description > What was changed in this pull request? This adds a `HorizontalGeneBED12AnnotationsTrack` class and `gene-bed12-annotation` datatype for use with bigBed (BED12) sources.  ## Checklist...