Alexander Blaessle

Results 8 issues of Alexander Blaessle

Hi scanpy team, I am not sure if I just missed it, but there does not seem to be a way to specify a different filename for ``.mtx`` files. For...

## Is your feature request related to a problem? Please describe h5ad/seurat are becoming default file formats for scRNAseq. It would be nice if the pipeline outputs one of the...

enhancement

# nf-core/scrnaseq feature request ## Is your feature request related to a problem? Please describe Currently adding information about 10X version/chemistry is necessary. If this is not known a priori...

enhancement

For illumina sample sheets with 10X multiplex libraries we often have multiple samples with the sample indexes. This obviously does not work with the package right now. Another option would...

It seems that in general QThreads block any other interaction with the GUI. It actually already blocks the initiation of the ``__init__`` of the progressbar dialog. It might be worthwile...

After readjusting the mesh volSize via Simulation->Mesh->Mesh Settings, we get the following error: ```` Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pyfrp/gui/pyfrp_app.py", line 1756, in generateMesh self.editMesh() File "/usr/local/lib/python2.7/dist-packages/pyfrp/gui/pyfrp_app.py", line 1742,...

KeyPressEvent callback is somehow now working. Error message: ```` Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/matplotlib/backends/backend_qt5.py", line 315, in keyPressEvent FigureCanvasBase.key_press_event(self, key) File "/usr/local/lib/python2.7/dist-packages/matplotlib/backend_bases.py", line 1833, in key_press_event self.callbacks.process(s, event)...

PyFRAP Wizard closes when in first geometry dialogue someone presses "Done", but continues when someone presses "X", reported under OSX.