Alan Hoyle
Alan Hoyle
I am also having trouble submitting a job with anything other than 1 CPU core ``` mem = 32000 cpus = 4 partition = 'mypartition' job_name = "sweet_job_name" awesome_job_opts =...
AHHH! I figured it out from @cahartsell's comment above. it should be: ` 'cpus_per_task': cpus,` underscores works, dashes doesn't!
https://github.com/Illumina/pyflow/issues/20
Python2 has been out of support for almost a year and a half now and it's becoming increasingly difficult to use py2 as pip and other tools have cut off...
The Dockerfile above building "FROM mono" docker image no longer works with the current Canvas. Here is an updated Dockerfile that builds off of the microsoft/dotnet docker image. ``` FROM...
Note that I can't find in the Canvas source code where the Canvas bash script is located. The above Dockerfile builds an image based on the 1.39.0.1598 release of Canvas...
I am seeing this warning as well. It occurs for me when the current version of VEP (103.1) is installed using Bioconda, and VEP throws the warning at startup every...
I've been using unix for decades and only just became aware of the `ls --dereference`, and I'm surprised that `exa` doesn't implement it. Please implement this feature!
Per email conversation, the issue arises with coordinate-sorted inputs, as opposed to collated/sorted by read name.
I came looking for a generic notifier library, and KnockKnock is so close! I also wish it could take the notification message as a parameter. One imagines it wouldn't be...