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Published 20 hours ago • verified publisher icon Illumina

Python 3 support?

Open alanhoyle opened this issue 5 years ago • 7 comments

Python 2 is end of life on 1/1/2020. There was an old issue reported #54 about this, but it was closed more than a year ago with some mention of replacing pyflow with some C++ based scheduler or maybe updating pyflow to support python 3. Is something planned before Python2 goes EoL?

alanhoyle avatar Oct 16 '19 20:10 alanhoyle

https://github.com/Illumina/pyflow/issues/20

alanhoyle avatar Oct 16 '19 20:10 alanhoyle

Any progress in moving away from pyflow?

Stikus avatar Dec 19 '19 08:12 Stikus

Python2 has been out of support for almost a year and a half now and it's becoming increasingly difficult to use py2 as pip and other tools have cut off support. Is there any way we can get Strelka2 updated?

alanhoyle avatar May 14 '21 22:05 alanhoyle

Porting to python 3 is important to us, with python 2 deprecated nixpkgs is looking to remove python 2 from the package tree (NixOS/nixpkgs#148779).

jbedo avatar Dec 05 '21 22:12 jbedo

I hope to see this update!

serge2016 avatar Dec 06 '21 18:12 serge2016

Any update regarding python3 support?

Venky2804 avatar May 15 '23 09:05 Venky2804

Hello! Can we hope for strelka2 support? Or now only Dragen is supported?

serge2016 avatar May 15 '23 09:05 serge2016