scivision

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Create an Intake driver outputting a numpy array and metadata in a pandas dataframe

2

#98 #123

ots22

Get scivision to work with python >=3.10

3

I noticed when adding a test for `load_pretrained_model` in `scivision/io/reader.py` that the test was failing on GH actions because we had it set up to use `3.X` which was using...

edwardchalstrey1

Use standard keywords and phrases within the data and models catalogues

1

We should come up with, or preferably adopt, a standard list of keywords for building our catalogues. For instance, my intension was that "domains" refers to the scientific domains (e.g.,...

scotthosking

Allow model and data catalogues to keep track of whether a project is active

1

- Help manage expectations for users - Ideally a field present in the model/data-local metadata (responsibility of model/data provider, not the catalogue author) Suggestion of @miquelmassot

ots22

allow models to accept arguments at initialisation

1

We should pass arguments to models when they are loaded: https://github.com/alan-turing-institute/scivision/blob/001a8f82f52fe4d245bd8b9f2f209761f992213c/scivision/io/autoplumber.py#L33-L35

quantumjot

Decide how to handle large datasets in Scivision

2

This was a point raised at the REG allocation meeting. - Could the Scivision frontend support running at scale (in the cloud when run through Binder, say?) - Might be...

edwardchalstrey1

ots22

ots22

Investigate usefulness of creating a scivision docker image

3

@acocac noticed with a scivision plugin package he is creating that a because a requirement is [detectron2](https://detectron2.readthedocs.io/en/latest/tutorials/install.html), he needed things like PyTorch and torchvision pre-installed for this to work correctly....

edwardchalstrey1

Update test files to use local data (See comment: https://github.com/alan-turing-institute/scivision/pull/75#discussion_r753133735) - [ ] update `tests/test_dataset_scivision.yml` (intake config) to link to a real local dataset and test attributes of the loaded...

edwardchalstrey1