AJ Medford
AJ Medford
Allow user to specify interval; dump data into pickle file every interval to allow restarts.
Add a scaler which uses one existing scaler for one descriptor, and a different scaler for the other. This would allow mapping activity with e.g. the binding energy of an...
Adding doc strings to functions, make all lines shorter than 80 characters, hunt down CamelCase variable names, clean up any other instances of laziness on AJ's part.
Update the tutorial to be consistent with the input format of the interaction model, include second order interactions, etc.
It is common for the rate equations to have a "trivial solution" where a zero value for one coverage leads to a valid steady-state solution regardless of the values of...
When plotting scaling relations with negative coefficients the negative coefficients are sometimes omitted from the plot.
Nasty "quick fixes" are tagged with #HACK. Ideally all these should be changed to something more beautiful.
Documentation is currently available at catmap.readthedocs.org, but a number of issues still exist. Feel free to break some of these out into separate issues if you want to work on...
The infrastructure for Travis CI testing has been added, and a very crude testing system which runs the tutorials and ensures that there are no crashes at each commit. However,...