Alex H. Wagner, PhD

Mostly this is for consistency with the spec so far, where we can link to all external concepts associated with a concept, e.g. [sources for Allele](https://vrs.ga4gh.org/en/stable/terms_and_model.html#:~:text=SequenceState%22%0A%20%20%7D%2C%0A%20%20%22type%22%3A%20%22Allele%22%0A%7D-,Sources,-ISOGG%3A%20Allele%20%E2%80%94%20An). Our plan is to...

I agree, this would be a good change. Of these options, my preference would be for base64url for consistency and brevity.

Thanks for sharing your thoughts @rrfreimuth. I'll put my responses here in the hope it will facilitate additional feedback. I appreciate the call for semantic consistency, particularly as it relates...

This should be revisited with the SA team with the upcoming [gene and transcript models](https://lucid.app/lucidchart/aeaabf97-a0cd-482e-9297-6a2f18f80ab4/edit?invitationId=inv_a5041b50-7dc8-401e-9241-9013a5d27270&referringApp=slack&page=MV~PZNcMt~4A#).

SequenceLocation definition: > A :ref:`Location` defined by an interval on a referenced :ref:`Sequence`. SequenceInterval definition: > A SequenceInterval represents a span on a :ref:`Sequence`. Positions are > always represented by...

Proposed resolution: implement as suggested.

This is now an issue of generalizability of the `reverse_complement` feature of the `DerivedSequenceExpression` ([schema](https://github.com/ga4gh/vrs/blob/1.2/schema/vrs.yaml#L458-L459)). Putting it on the v2-dev discussion list.

The field is indeed supposed to be `species_id`; just another reason why we are transitioning over to the meta-schema / single definition tooling for both docs and schema. Thank you...

See the draft Genotype model proposed in PR #394

C/P from #51, closed as duplicate: A goal for this issue is to write a document that includes fusion use cases and a proposed model. This should also serve as...