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Define how to refer to reverse complement sequences

Open reece opened this issue 4 years ago • 1 comments

Use cases:

  • Insert inverted sequence
  • Feature (gene, exon, intron, transcript) defined on rev comp

reece avatar Feb 16 '21 22:02 reece

This is now an issue of generalizability of the reverse_complement feature of the DerivedSequenceExpression (schema). Putting it on the v2-dev discussion list.

ahwagner avatar Oct 30 '21 17:10 ahwagner

the current SV draft uses seqloc start and end inside Adjacency structures to convey sequence directionality.

ahwagner avatar Mar 09 '24 16:03 ahwagner