acevedol

Results 47 comments of acevedol

Build KG2.7.6

Error in rule `Finish`: ``` Error in rule Finish: jobid: 0 RuleException: AttributeError in line 13 of /home/ubuntu/kg2-code/Snakefile: 'InputFiles' object has no attribute 'simplified_output_nodes_file_full' File "/home/ubuntu/kg2-code/Snakefile", line 13, in __rule_Finish...

Build KG2.7.6

Problems with edges: ``` There are no edges from infores:intact in this build. There were 271577 in the previous build. There are no edges from infores:ncbi-taxonomy in this build. There...

Build KG2.7.6

I re-ran the IntAct Conversion, and it looks better, but I'm still not sure what's going on with NCBI Taxon & Taxonomy

Build KG2.7.6

Wrong version showing in `s3://rtx-kg2-public/kg2-version.txt`... It says 2.7.7 instead of 2.7.6.

Build KG2.7.6

The `kg2-simplified-report.json` no longer has any `rename:` predicates

Build KG2.7.6

Loading `KG2.7.6` onto `KG2endpoint3`

Build KG2.7.6

Pushed `KG2.7.6` tag

Test script

Suggested use pytest

Specificity Index

Default value for specificity index node property set to None for now

Specificity Index

I did not expect to see only one node for IntAct. Testing in `buildkg2.rtx.ai` for more info