PrimerMiner

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not available for this version of R

6

Hello, I'm trying to install PrimerMiner, but came to me the following error: Warning in install.packages : package ‘PrimerMiner-0.21.tar.gz’ is not available for this version of R What's the problem?

babinecha

Error in rawToChar(res$content) : long vectors not supported yet: raw.c:68 I was able to run it successfully the first time I downloaded it, but when I downloaded the same content...

YechengWu1123

Error in read.fasta(readin[k], as.string = T) : no line starting with a > character found

2

Error in read.fasta(readin[k], as.string = T) : no line starting with a > character found 

YechengWu1123

Hi Dears I got message when trying to download PrimerMiner through the code > install.packages("PrimerMiner", repos = NULL, type="source", dependencies=T): Warning: invalid package 'PrimerMiner' Error: ERROR: no packages specified Warning...

Saleh-Aljaafari

Some errors when trying to batch download with 12S and 16S markers

2

Hello, I am finding two errors when batch downloading using PrimerMiner... I have set the marker in the config file to: Marker = c("16s", "16S", "16S ribosomal RNA", "16s Ribosomal...

ucbtmae

plot_alignment step restrictions

1

Hi @VascoElbrecht I hope everything's going well! I have been using PrimerMiner to develop some specific and metabarcoding primers, so I've been using some Geneious fasta files that I already...

ucbtmae

implement toupper or different fasta read in method. Thank you Evgeny Shcherbakov for finding this issue.

VascoElbrecht

based on table 7 in https://esajournals.onlinelibrary.wiley.com/doi/full/10.1002/ecs2.3193

VascoElbrecht

batch download - unknown error

4

Error in batch download script

VascoElbrecht

Error installing JAMP locally

1

Hi Vasco We follow the package_tutorial.R and when we run the following line: install_github("VascoElbrecht/JAMP", subdir="JAMP") We obtain the following error: Downloading GitHub repo VascoElbrecht/JAMP@master tar: Failed to set default locale...

LarrainK