Thomas Shafee

Additionally, changing the font to sans-serif as default would be ideal

Might as well add my support for this. I've only just discovered using R notebooks rather than just plain workflow scripts and it'd really changed how I work.

I can confirm this would be hugely useful as a general feature. I'm looking to use this package for visualising networks of COVID19 publications clustered by authors, topics and citations...

I've found that in both this and network diagrams benefit from colouring by cluster (either clustering by label propagation [1] or DBSCAN [2]). It also allows for logical orering of...

Interesting. I've been having a go at a co-topic network using networkD3 in [R]. It works well locally, but I'm still working on getting the website to function properly: -...

It's possible to do simple static diagrams via [R] packages like [igraph](https://igraph.org/r/). A major bonus, however, might be interactive/responsive graphics. I've tested out the [networkD3](https://christophergandrud.github.io/networkD3) and [chorddiag](https://github.com/mattflor/chorddiag) packages (both of...

I've now added the visualisation code to [wikiPackageTesting.R](https://github.com/petermr/openVirus/blob/master/wikiPackageTesting.R) in the _#Visualisations_ section Data options: - Easiest: I should be able to read the html tables (e.g. [full.dataTables.html](https://github.com/petermr/openVirus/blob/master/biorxiv700/full.dataTables.html) as a matrix...

### Data format and storage The facet cell listing multiple items is fine (essentially I'll aim to turn it into a nested list in [R]). Similarly, ideally there should be...

Ok, so I've managed to get the concomitant **_co-topic_** graph working reasonably robustly! In order to make it interactive, I've built a simple shiny app. It works locally fine locally,...

The CJ Yetman comment fixed it! Try https://ts404.shinyapps.io/topicnetwork now! I'll have to test why the fix works to avoid re-introducing it later, but v. useful for now.