Moray Smith

Results 11 issues of Moray Smith

I tried using the conda installation of CONSENT but it was failing to polish the example reads: ``` CONSENT-polish --contigs example/rawAssembly.fasta --reads example/reads.fasta --out example/polishedAssembly.fasta [Tue 18 Jan 14:15:53 GMT...

Hiya! I'm finding that tombo preprocess halts around halfway through any run. The first half runs relatively quick (predicted 2 hour run time) but this appears to slow down exponentially...

bump resistify to v0.1.1 ---- Please read the [guidelines for Bioconda recipes](https://bioconda.github.io/contributor/guidelines.html) before opening a pull request (PR). ### General instructions * If this PR adds or updates a recipe,...

please review & merge

``` pandoc 3.2 Features: +server +lua Scripting engine: Lua 5.4 typst 0.11.1 pandoc-crossref v0.3.17.1 git commit UNKNOWN (UNKNOWN) built with Pandoc v3.2, pandoc-types v1.23.1 and GHC 9.6.3 macOS Sonoma Version...

bug

Hello! Original issue with details is here: https://github.com/jgm/pandoc/issues/9888 When generating typst documents, the figure caption is duplicated. This doesn't occur for word or latex output.

The provided conda environment contains tagged dependencies that are specific to the anaconda channel such as `libwebp==1.3.2 h11a3e52_0`. Our HPC (and others) have disabled the anaconda and defaults channels due...

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

new module

### Is there an existing module for this? - [x] I have searched for the existing module ### Is there an open PR for this? - [x] I have searched...

new module

It seems that the latest build of `hmmer`, `jackhmmer` can fail due to missing libraries: ``` jackhmmer: error while loading shared libraries: libopenblas.so.0: cannot open shared object file: No such...

Hi @zhangrengang The default conda install is not restricted to `python