Sven Winter

Subsampled BAM files generated with sambamba subsample are truncated and cannot be indexed neither with sambamba index nor samtools index We have tried different sambamba version from conda (0.6.9, 0.8.2)...

Hi, I have tried several older and newer versions of Sambamba (depth) but for whatever reason my output lists the header and then starts listing each position of the genome...

How to generate a pdf or svg file?

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Hi, I managed to generate html and png plots. However, I always receive the following error: Error in htmlwidgets::saveWidget(as.widget(gply), file = paste0(opt$output_filename, : Saving a widget with selfcontained = TRUE...

Hi, I am trying to run age-preqc-report.py. However, it was not included in the condo sga installation so I had to download it from GitHub. It recognizes my output from...