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Sambamba subsample produces truncated BAMs

Open Sven-Winter opened this issue 2 years ago • 0 comments

Subsampled BAM files generated with sambamba subsample are truncated and cannot be indexed neither with sambamba index nor samtools index

We have tried different sambamba version from conda (0.6.9, 0.8.2) with the same results.

Sven-Winter avatar Jun 14 '23 13:06 Sven-Winter