Steven M. Van Belleghem

Hi, This does seem to be working for me: library(patternize) library(recolorize) #I have all files within the same working directory for this small test IDlist

Aha, something is wrong with your landmarks and coordinates. They should not be decimals, but pixel coordinates. To get these, I personally use ImageJ > export XY coordinates. Steven --------------------------------...

Awesome! Let me know if anything else pops up! Steven -------------------------------- Van Belleghem Steven From: brunacama93 ***@***.***> Sent: Tuesday, 7 May 2024 15:51 To: StevenVB12/patternize ***@***.***> Cc: Steven M. Van...

Hi Janis, I just ran the salamander example with the latest code and it’s working fine for me. Your output should be looking like this: [1] "Choose points to identify...

Hi Janis, After your code failing, is an image plotted? Can you then try locator(n=1) and tell me what the output looks like? Steven From: janisuser ***@***.***> Sent: Friday, February...

I'm scratching my head. Are you working on a Mac? I'm wondering if it's a X11 device problem. The error where it says there's no pixels sound like it's not...

Hi, Sorry about your errors. I believe it might be an error with R studio itself, failing to give the correct coordinates. Can you try running it in regular R?...

Hi Filipe, First thing that come to mind are MANOVA (which you can perform on the pixel matrices): https://www.reneshbedre.com/blog/manova.html Mantel test to correlate patterns with (autocorrelated) spatial distances: https://www.rdocumentation.org/packages/ape/versions/5.6-2/topics/mantel.test Hope...

Hi Jevohna, might it just be a typo? You have the 'landmarkList' as 'andmarkList' when you call the function makeList(). Hope this is it. Otherwise I'll keep troubleshooting! (Also, please...

Hi Fede, Please check the content of the landmarkList and imageList object and verify that they are the correct and same length. Steven -------- Original message -------- From: efegidri ***@***.***>...