Yuhang Guo

+1 I do need to merge all samples's UniqueCount files to a single tsv file.

@jonassibbesen I followed the method “Executing BayesTyper on sample batches” to genotyping my samples, when I Combine the the batch vcf files using bcftools merge, Error occured: Failed to open...

I have had the same confusion.

@marekkokot Why the data stores in RAM in stage 1 ? And when will the temp file used? There is another problem, I run the data at the first time...

I solved the problems , I run command line : "kmc -k55 -ci1 -m50 -r -fbam /data/map_res/trimmed-SK/P2.sorted.bam ./00-kmc-res/P2.sorted.bam ./kmc-tmp/", it works. But I can't use" -t -sr and -m" to...

Thanks for your reply. I will try other values to get the best parameters.

代理端口号是这个吗？ 

I get the answer in readDelly: `DellyCont =readsSupport& DellyCont$size>=regSizeLowerCutoff& DellyCont$size

@zm20074970 Have you solved it?

this framework only support by blasr@cc3379 ,other version is not supported to work